Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDFKNKKWLFLAPLAGY--------TDLP---FRSVVKKFGVDVTTSEMVSSHSLVYAF-----------DKTSKMLEK--SPLEDHFMAQISGSK-----------------------E----------------------SVVKEAVEKINALDHVSGIDFNCGC---------PAPKVANHGNGSGLLKDLNHLVEILKVIRENTN--KKITSVKVRL------GFEKKIPKEIAHALNDAPVDYVVVHGRTRSDRYQ---KDKIDYESIALMKKILKKPVIANGEIDSVKKAFEVLQITQADGLMIGRATLRAPWIFWQIRNNTTELPAVVKKDLVLEHFDKMVEFYGDRGVIMFRKNLHAYAKGEMQASAFRNCVNTLTEIKSMRESIEEFFNQEMLQSEVPLWVELNQKSV |
| 3HGJ Chain:A ((11-336)) | GGLRLKNRLAMSPMCQYSATLEGEVTDWHLLHYPTRAL-GGVGLILVEATAVEPLGRISPYDLGIWSEDHLPGLKELARRIREAGAVPGIQLAHAGRKAGTARPWEGGKPLGWRVVGPSPIPFDEGYPVPEPLDEAGMERILQAFVEGARRA-LRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELP-LFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGLRTGAVGLITTPEQAETLLQAGSADLVLLGRVLLRDPYFPLRAAKALGVAPEVPPQYQRGF--------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HGJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -101637 for 1923 contacts (-52.9/contact) +
2D Compatibility (PS) -24866 + (NN) -10430 + (LL) 6756
1D Compatibility (HY) -3200 + (ID) 2100
Total energy: -135477.0 ( -70.45 by residue)
QMean score : 0.425
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