Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLEALNALNQLNALHSKNAAHHFNATL-PILLKVLEKQDKDLFLLQVGNRIIPTKSEQELKINQPYFAIMQRNQLGDIVLKNLVPAPKILDALDDLPVIEMKKLKE-ILSAKDNTPLKEYKELLSEKLIHAKSSQEFLNTANMLLSLQSQVLSFVVENERKKAFLQMKAKKQSVDFYALYPNLGEIGGVIYLKEKEKQLFLKTTLQRTKEVLKEAQNTLLGFSFVEIVCEKTPMLFAFEDRLLDTLG |
4U2X Chain:A ((1-216)) | DLEKGVVLSDLCNFLVSQTIQGWKVYWAGIEFDVTHKGMALLHRLKTNDFAPAWSMTRNL------FPHLFQN-----------PNSTIESPLWALRVILAAGIQDQLIDQSLIEPLAGALGLISDWLLTTNTNHFNMRTQRVKEQLSLKMLSLIRSNILKFINKLDALHVVNYNGLLSSIEIGTQNHTIIITR-TNMGFLVELQEPDKSAMNRMKPGPAKFSLLH-------------ESTLKAFT |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4U2X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -4163 for 1613 contacts (-2.6/contact) +
2D Compatibility (PS) -22499 + (NN) -3683 + (LL) 2724
1D Compatibility (HY) -6800 + (ID) 1850
Total energy: -36271.0 ( -22.49 by residue)
QMean score : 0.242
|
|
|