Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLQTINLTQRYAT-KKLFENVNIKLDKNKRYGLIGANGAGKSTFLKILSKSIDCSSGEVIITSG-MRMGVLGQDQYAFE--DLSLKDAVLIGNRRLYDAIKEKERLYTEGDLSDDKVNARLGELETICVEEDPMYECEVVIEKILEDLGIPSSKHNDLMKTLPSSDKFKILLAQVLFPKPDILLLDEPTNNLDLNAIEWLENNLKRH---EGTMVVISHDRHFLNAVCTHILDLDFHSVREFSGNYDDWYIASTLIAKQQEAERNKKLKEKEELEKFIARFSANASKAKQATSRQKQLDKLDIQSLAISSRRDPSIIFKPKRTIGNEALECENISKSYDDQIVLNQVSLKVMPKDKIALIGPNGVGKSTLCKILVEELKPDTGVVKWGATVLKGYFPQNVSEEISGEETLYQWLFNFNKK--IESAEVRNALGRMLFNGEEQEKCVNALSGGEKHRMVLSKLMLEGGNFLVLDEPTNHLDLEAIIALGEALFKF----DGALICVSHDRELIDAYANRIIELVPSPKGASIIDFKGSYEEYLASKK |
| 3J16 Chain:B ((82-559)) | -----HVTHRYSANSFKLHRLP-TPRPGQVLGLVGTNGIGKSTALKILAGKQKPNLGRFDDPPEWQEIIKYFRGSELQNYFTKMLEDDIKAIIKP--QYVDNIPR----------AIKGPVQKVGELLKL-R-MEKSPEDVKRYIKILQLEN-VLKRDIEKLSGGELQRFAIGMSCVQEADVYMFDEPSSYLDVKQRLNAAQIIRSLLAPTKYVICVEHDLSVLDYLSDFVCIIYGVPSVY--GVVTL---PASVRE------------G---INIFLDGHIPA----ENLRFRT---EAL---QFRI---ADATE--DLQNDSASRAFSYPSLKKTQ-GDFVLNVEEGEFSDSEILVMMGENGTGKTTLIKLLAGALKPDEGQDIP--KLNVSMKPQKIAPKF--PGTVRQLFFKKIRGQFLNPQFQTDVVKPLRID-DIIDQEVQHLSGGELQRVAIVLALGIPADIYLIDEPSAYLDSEQRIICSKVIRRFILHNKKTAFIVEHDFIMATYLADKVIVFEGI-PSK-N-AHARAPESLLTGCN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J16.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109239 for 3800 contacts (-28.7/contact) +
2D Compatibility (PS) -49693 + (NN) -21719 + (LL) 4084
1D Compatibility (HY) -19200 + (ID) 4200
Total energy: -199967.0 ( -52.62 by residue)
QMean score : 0.318
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