Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCGVLSLQARLSFENCSKPLDCSLFATTCTPQNPIGSCMVSSQGGVCGVLSLQ-ARLSFENCSKPLDCSLFATTCTPQNPIGSCMVSSQGGVRGVLSLQARLSFKNCFLVKSLKPSQLTLMLTGFLGGFSFLTTGFW
1QYS Chain:A ((3-94))
-----DIQVQVNIDDNGKNFDYTYTVTT--------------ESELQKVLNELMDYIKKQGA-KRVRISITART--------------KKEAEKFAAILIKVFAELGYNDINVTFDGDTVTVEGQL-----------
General information:
TITO was launched using:
RESULT:
Template:
1QYS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18249 for 626 contacts (-29.2/contact) +
2D Compatibility (PS) -8844 + (NN) 3857 + (LL) 1284
1D Compatibility (HY) 2400 + (ID) 450
Total energy: -20002.0 ( -31.95 by residue)
QMean score : 0.075
(partial model without unconserved sides chains):
PDB file :
Tito_1QYS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QYS-query.scw
PDB file :
Tito_Scwrl_1QYS.pdb
: