Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNFQENLAALDLEYLWHPCSQMQEHQNFPIIPIKKAQGIYLYDFNDNAYMDLISSWWVNLFGHNNAYISQQLKNQIDNLEHVLLASFSHKPIITLSQRLCQLTG--MDKCFYADNGSSCIEIALKMSYHAHFLKNQTRRKKLFLSLSNSYHGETLGALSVGDVKLYKDTYTPLLLKNLITPVPKN--DSEI-ENSLNALKRLLDKHGEEICAFIAEPLLQCAGNMHIYSAKYLKQAVLWCKQKNIHIIFDEIATGFGRTGSMFAYEQCGIKPDFLCLSKGISGGYLPLSALLTHNEIYNQFYAPYEENKAFLHSHSYTGNALACACANATLDIFEKENVIEKNKALSEFIFSALQNALKPLIERQVVSDLRHLGMVFAFEVFLQTKERLSLAVFKK-ALKKGLLLRPLNNTIYLMPPYIITHEEIKKAIAGLVEAIDELKKAENK |
1S08 Chain:B ((7-423)) | --------AFDQRHILHPYTSMTS--PLPVYPVVSAEGCELILSDGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHAPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKGEARQR--FLTFRNGYHGNTFGAMSVCDP-------------NLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEIAPDILCLGKALTGGTMTLSATLTTREVAETIS--N----CFMHGPTFMGNPLACAAANASLAILESGDWQQQVADIE----VQLREQLAPARDAEMVADVRVLGAIGVVE----TTHPVNMAALQKFFVEQGVWIRPFGKLIYLMPPYIILPQQLQRLTAAVNRAVQDETFFC-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1S08.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -311568 for 3369 contacts (-92.5/contact) +
2D Compatibility (PS) -42167 + (NN) -14010 + (LL) 3724
1D Compatibility (HY) -34800 + (ID) 7350
Total energy: -406171.0 ( -120.56 by residue)
QMean score : 0.520
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