Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQTLFKEITSKCYVNGNEMKE---NSSNVLDQYFTKPSVALKCFQKACEVIKKYENPDDFIFLEPSAGDGVFYDLFPK-------------------DRRIGIDIEPKRDG----------------FIQCDFLNYKL-PVHQKVICLGNPPFGHRGV--------------------------MALEFINHAR----NCDFVCFILPMFFESQ---GKGSIKYRVK-GLNLLYSERLEKNAFIDFKNKEVDVHCVFQIWSKKYQNKKSEFSWYKNRHKEPFSEYIKVFTVSLAKNRECGKEWIFNQKASFYISSTFYKSTQIVENFEEVKYQSGIAVVFTSADKVLNAKLKKLFQEIDWTKYASLATNSCYHLGKSHIFQALHDHLDSLKGN |
| 3KHK Chain:A ((203-448)) | ------DILGHVY--EYFLGQFALAEGKQGGQYYTPKSIVTLIVEMLEPY--------KGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLANGSMSSNTNNEGEIRKTLVEQDLVECMVALPGQLFT-----NTQIPACIWFLTKDKNAKNGKRDRRGQVLFIDARKLGYMKDRVLRDFKDEDIQKLADTFHNWQQEWSEENNQAGFCFSADLALIRKNDFVLTPGRYVG---------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KHK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -82275 for 1268 contacts (-64.9/contact) +
2D Compatibility (PS) -17856 + (NN) -4396 + (LL) 4344
1D Compatibility (HY) -2400 + (ID) 1350
Total energy: -103933.0 ( -81.97 by residue)
QMean score : 0.331
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