Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKSAIFVLSGFLAFLLYALLLYGLLLERHNKEAEKILLDLNKKDEQAIDLNLEDLPSEKKNEKIEKVTEKQGDFLEPKEEPKEEPEESLEDIFSSLNDFQEKTDKNAQKDEQKNEQEEQRRLREQQRLKQNQENQEMLKGLQQNLNQFTQKLESVKNKTLDLQIPKQDGVDEKAYQEWYAQIYQILYKGWRGVFY---H-K-ASVSVLIMITKDGEF-DYTILSYSDFKDYNKSVMTLLDDLKKVDFPPYPGGNMISIKVNFTTKEEQ |
| 1U07 Chain:A ((158-232)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RNQPQYPARAQALRIEGQVKVKFDVTPDGRVDNVQILSAKPANMFEREVKNAMRRWR--YEPGKPGS-GIVVNILFKI---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U07.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -47955 for 439 contacts (-109.2/contact) +
2D Compatibility (PS) -7461 + (NN) -4128 + (LL) 15004
1D Compatibility (HY) -800 + (ID) 700
Total energy: -46040.0 ( -104.87 by residue)
QMean score : 0.443
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