Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKCEKRVFDSLPSTQTYLLEKLKSNKLKAPVLVLAKNQSAGIGSRGNIWEIVESALTFSLALNASDLPKDLPMQASALYLGFL-FKEVLKELGSQTWLKWPNDLYLGDQKIGGVMVNVYKGMRVCGIGVNRVSTKWACLDIGASDDWIIESFLKKIEENLFWGEVLSKYALEFHRSNSFNFHNDWGEAVSLKDAELLEDGRICIKGKIYDRM
1WNL Chain:B ((16-131))
--------FQEITSTNEFA----KTSYLEEGTVIVADKQTMGHGRLNRKWESPEGGLWLSIVLSPKVPQKDLP---KIVFLGAVGVVETLKEFSIDGRIKWPNDVLVNYKKIAGVLVEGKGDKIVLGIGLNVNNKVPNGATSMKLELGSEVPLLSVFRSLITNLDRLYLNFLKNPMDILNLVRDNMILGVRVKILGDGSFEGIAEDIDDFGRL
General information:
TITO was launched using:
RESULT:
Template:
1WNL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51875 for 817 contacts (-63.5/contact) +
2D Compatibility (PS) -12786 + (NN) -10359 + (LL) 1844
1D Compatibility (HY) -8000 + (ID) 2000
Total energy: -83176.0 ( -101.81 by residue)
QMean score : 0.422
(partial model without unconserved sides chains):
PDB file :
Tito_1WNL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WNL-query.scw
PDB file :
Tito_Scwrl_1WNL.pdb
: