Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKKVVGEIKLQIPAGKANPSPPVGPALGQRGVNIMEFCKAFNERTKDMGSFNIPVIITVYQDKSFTFITKKPPVTDLIKKASGVEKGSDNPLKNKIAKLTHKQVEEIAQLKMEDLNTSTMEAAKKIVMGSARSMGVEVVD
3CJS Chain:B ((2-72))
--KKVVAVVKLQLPAGKATPAPPVGPALGQHGANIMEFVKAFNAATANMGDAIVPVEITIYADRSFTFVTKTP--------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3CJS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51268 for 495 contacts (-103.6/contact) +
2D Compatibility (PS) -8235 + (NN) -8630 + (LL) 5292
1D Compatibility (HY) -7200 + (ID) 2400
Total energy: -72441.0 ( -146.35 by residue)
QMean score : 0.809
(partial model without unconserved sides chains):
PDB file :
Tito_3CJS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CJS-query.scw
PDB file :
Tito_Scwrl_3CJS.pdb
: