Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLEDYAISLEEV--N---FNDFIVVDVRELDEYEELHLPNATLISVN-DQEKLADFLSQHKDQKVLLHCRAGRRALDAAKSMHELGYTPYYLEGNVYDFEKYGFRMVYDDTSLSDKKN
3FOJ Chain:A ((2-99))
----ESITVTELKEKILDANPVNIVDVRTDQETAMGIIPGAETIPMNSIPDNLNYF---NDNETYYIICKAGGRSAQVVQYLEQNGVNAVNVEGGMDEFGDEGLEH------------
General information:
TITO was launched using:
RESULT:
Template:
3FOJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45207 for 659 contacts (-68.6/contact) +
2D Compatibility (PS) -10068 + (NN) -2340 + (LL) 1244
1D Compatibility (HY) -4400 + (ID) 1150
Total energy: -61921.0 ( -93.96 by residue)
QMean score : 0.596
(partial model without unconserved sides chains):
PDB file :
Tito_3FOJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FOJ-query.scw
PDB file :
Tito_Scwrl_3FOJ.pdb
: