Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGSIGSMGKPIEGFLVAAIQFPVPIVNSRKDIDHNIESIIRTLHATKAGYPGVELIIFPEYSTQGLNTAKWLS-EEFL-LDVPGKETELYAKACKEAKVYGVLSIMERNPDSNENPYNTAIIIDPQGKIILKYRKLFPWNP-IE-PWYPGDLGMPVCEGPGGSKLAVCICHDGMIPELAREAAYKGCNVYIRISGYSTQV-NDQWILTNRSNAWHNLMYTVSVNLAGYD-NVFYYFGEGQICNFDGTTLVQGHRNPWEIVTGEIYPKMADNARLSWGLENNIYNLGHRGYVAKPGGEHDAGLTYIKDLAAGKYKLPWEDHMKIKDGSIYGYPTTGGRFGK |
| 1F89 Chain:A ((5-278)) | -------KILSQKIKVALVQLSGS----SPDKMANLQRAATFIERAMKEQPDTKLVVLPECFNSPYSTDQFRKYSEVINPKEPSTSVQFLSNLANKFKIILVGGTIPELDPKTDKIYNTSIIFNEDGKLIDKHRKVHLF--HESETLSPGEK-STTIDTK-YGKFGVGICYDMRFPELAMLSARKGAFAMIYPSAFNTVTGPLHWHLLARSRAVDNQVYVMLCSPARNLQSSYHAYGHSIVVDPRGKIVAEAGE-GEEIIYAELDPEVIESFRQAVPLTKQRRF-------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1F89.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161941 for 2291 contacts (-70.7/contact) +
2D Compatibility (PS) -28600 + (NN) -16740 + (LL) 1416
1D Compatibility (HY) -6800 + (ID) 2900
Total energy: -215565.0 ( -94.09 by residue)
QMean score : 0.458
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