Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------MKRFDL-RPLKADIFERLEELIEKEMQPNEVAIFMFEVGDFS-----NIPKSAEFIQSKGHELLNSLRFNQADWTIVVRKKA
1F3C Chain:A ((1-89))
MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
General information:
TITO was launched using:
RESULT:
Template:
1F3C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22248 for 563 contacts (-39.5/contact) +
2D Compatibility (PS) -8020 + (NN) 167 + (LL) 0
1D Compatibility (HY) -800 + (ID) 700
Total energy: -31601.0 ( -56.13 by residue)
QMean score : 0.347
(partial model without unconserved sides chains):
PDB file :
Tito_1F3C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1F3C-query.scw
PDB file :
Tito_Scwrl_1F3C.pdb
: