Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKAGIIGLGLMGGSLGLALQEWGRFKSVIGYDHNALHAKLALTLGLVDE-CVEFEK--ILECDVIFLAIPVEGIIECLKKMTP-IKKSATIIDLGGAKAQILHNIPKSIRQNFIAAHPMCGTEFYGPKASVKGLYENALVILCDLEDSGTEQVEIAKEIFLGIKARLIKMKSNEHDTHVAYISHLPHVLSYALANSVLKQN-DPEMILSLAGGGFRDMSRLSKSSPLMWKDIFKQNRDNVLEAIEKCEKEIAQAKAWIENNDYESLAEWMAQANKLQEFM
2G5C Chain:A ((2-280))
QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVRTFREIAKKLSYILSEDATVTDQGSVKGKLVYDLENILGKRFVGGHPIAGTEKSGVEYSLDNLYEGKKVILTPTKKTDKKRLKLVKRVWEDVGGVVEYMSPELHDYVFGVVSHLPHAVAFALVDTLIHMSTPEVDLFKYPGGGFKDF---AKSDPIMWRDIFLENKENVMKAIEGFEKSLNHLKELIVREAEEELVEYLKEVKIKRMEI
General information:
TITO was launched using:
RESULT:
Template:
2G5C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -168670 for 2073 contacts (-81.4/contact) +
2D Compatibility (PS) -29187 + (NN) -11315 + (LL) 248
1D Compatibility (HY) -18800 + (ID) 4100
Total energy: -231824.0 ( -111.83 by residue)
QMean score : 0.493
(partial model without unconserved sides chains):
PDB file :
Tito_2G5C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2G5C-query.scw
PDB file :
Tito_Scwrl_2G5C.pdb
: