Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----------------------MEFLSGYFLW------VKAFHVIAVIS----WMAALFYLPRLFV--YHAENAHKKEFVGVVQ-IQEKKLYSFIASPAM------GFTLITGILMLLIAPEMFKSG-------GWLHAK---------LALVVLLLIYHFYCKKCMRELEKDPTGKNARFYRVFNEIPTILMILIVILVVVKPF------------------
4I17 Chain:A ((4-226))
TTDPNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVTSKKWKTDALYSLGVLFYNNGADVLRKATPLASSNKEKYASEKAKADAAFKKAVDYLGEAVTLSPNRTEIKQMQDQVKAMI
General information:
TITO was launched using:
RESULT:
Template:
4I17.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -143790 for 1037 contacts (-138.7/contact) +
2D Compatibility (PS) -15874 + (NN) -15392 + (LL) 0
1D Compatibility (HY) -400 + (ID) 1000
Total energy: -176456.0 ( -170.16 by residue)
QMean score : 0.423
(partial model without unconserved sides chains):
PDB file :
Tito_4I17.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4I17-query.scw
PDB file :
Tito_Scwrl_4I17.pdb
: