Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MHTVLQIGAGGVGSV-VAHKMGMNRDVFKNIILASRSLDKCHAIKESMLKKGLGEIGVEQVDADDTQALIALIQKHKPKVVVNVALPYQDLTIMQACLETKTHYIDTANYEHPDLAKFEYKEQWAFDKAYKEAGILGVLGAG--FDPGVTNAYVAHAQRHHFDTIHTLDILDCNAGDHKRPFATNFNPEINLREVSSKGRYYENGKWIETKPLEIKQVWAYPQIGEMDSYLLYHEELESLVKNVKGLRRARFFMTFSQNYLTHMKCLENVGMLGIKEIEHQGVKIVPIQFLKTLLPDPESLAKDTTGKTNIGCYMTGIKNNQDKTLYIYNVCDHKKCYEEVGSQAISYTTGVPAMCAAKMICNDTWSVEHFKAGVFNVEELNTDPFMEELIKQGLPYEVIER |
3RC1 Chain:A ((27-175)) | PIRVGVIGCADIAWRRALPALEAEPLT-EVTAIASRRWDRAKRFTERFG------GEP-------VEGYPALLERDDVDAVYVPLPAVLHAEWIDRALRAGKHVL-AEKPLT-----TDRPQAERLFAVARERGLLLMENFMFLHHPQHRQVADMLDEG-VIGEIRSFAASFTIPPKPQGDIRYQADVGGGALLDIGVYPIRAAGLFLGADLEFVGAVLRHERDRDVVVGGNALLTTRQGVTAQLTFGMEHAYTNNYEFRGSTGRLWMNRVFTPPATYQPVVHIERQDHAEQFVLPAHDQFAKSIRAFAQAVLSGEHPREWSEDSLRQASLVDAVRTGARDIYFP--------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RC1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85973 for 1073 contacts (-80.1/contact) +
2D Compatibility (PS) -15686 + (NN) -8151 + (LL) 3716
1D Compatibility (HY) 1200 + (ID) 900
Total energy: -105794.0 ( -98.60 by residue)
QMean score : 0.397
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