Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEVICKHYTPLDIASQAIRTCWQSFEYSDDGGCKDRDLIHRVGNIFRHSSTLEHLYYNFEIKGLSRGALQELSRHRIASLSVKSSRYTLRELKEVESFLPLNETNLERAKEFLVFVDDEKVNEMSVLALENLRVLLSE--------------HNIKNDLAKYAMPESYKTHLAYSINARSLQNLLTLRSSNKALKEMQDLAKALFDALPYEHQYLFEDCLKH
3GWC Chain:A ((33-232))
----------PALVEFAGRACYQSWSKPNPKTATNAGYLRHI-IDVGHFSVLEHASVSFYITGISRSCTHELIRHRHFSYSQLSQRYVP--EKDSRVVVPPGMEDDADL--------RHILTEAADAARATYSELLAKLEAKFADQPNAILRRKQARQAARAVLPNATETRIVVTGNYRAWRHFIAMRASEHADVEIRRLAIECLRQLAAVAPAVFADFEVT
General information:
TITO was launched using:
RESULT:
Template:
3GWC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51568 for 1322 contacts (-39.0/contact) +
2D Compatibility (PS) -19999 + (NN) -8354 + (LL) 1824
1D Compatibility (HY) -3200 + (ID) 2250
Total energy: -83547.0 ( -63.20 by residue)
QMean score : 0.359
(partial model without unconserved sides chains):
PDB file :
Tito_3GWC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GWC-query.scw
PDB file :
Tito_Scwrl_3GWC.pdb
: