Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MILSIESSCDDSSLALTRIEDAKLIAHFKISQEKHHSSYGGVVPEIASRLHAENLPLLLERVKISLNKDFSKIKAIAITNQPGLSVTLIEGLMMAKALSLSLNLPLILEDHLRGHVYSLFINEKQTRMPLSVLLVSGGH---------SLILEARD--Y-------------ED-----------------------I-----------------KIVATSLDDSFGESFDKVSKMLDLGY----PG--GPIVEKLALDYAHPNEPLMFPIPLKNSPNLAFSFSGLKNAVRLEVEKNAHNLNDEVKQKIGYHFQSAAIEHLIQQTKRYFKIKRPKIFGIVGGASQNLALRKAFEDLCAEFDCELVLAPLEFCSDNAAMIGRSSLEAYQKKRFIPLEKADISPRTLLKNFE |
| 3VTH Chain:A ((453-751)) | -----------------------------------------------------------------------DPEVVAHDMHKGYLST-----QYAKS----LDLPKIEVQHHHAHIASCMAEHN-LDEKVIGIAYDGTGYGTDGNVWGAEILVCDLKSFERIAHLKYKPLPGNELAIKKIYRTALGFIFDNISFYKNFVEQVDSRELDIILKQIDRKINTAYVSSMGRFFDAVAALIGVRKEVLFEGQAAMELESLMAESEEY---YEYEI--LKEDRYVIDPELILRQIYEDYMK------GFEKSYISAKFHNTVVNFTYDLANLIRKETGINKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNSKVPCNDGGISLGQAVIANKILEGSAWS--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VTH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120746 for 1809 contacts (-66.7/contact) +
2D Compatibility (PS) -24524 + (NN) -8500 + (LL) 7396
1D Compatibility (HY) -5600 + (ID) 1950
Total energy: -153924.0 ( -85.09 by residue)
QMean score : 0.444
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