Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------------------------------------------------------------------------------------------MKVEGLLGFLGAALGIGFSLMVLVIPDISQALEEESFFFYMLTIGSLVLSGVGLAGSFIVSH---------KPRLGGAMMVAAAIGCTMSISIMFLLPI-VLLAVGGLIALINYEEAASVEE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 3WDO Chain:A ((1-453)) | DYKMTPGERRATWGLGTVFSLRMLGMFMVLPVLTTYGMALQGASEALIGIAIGIYGLTQAVFQIPFGLLSDRIGRKPLIVGGLAVFAAGSVIAALSDSIWGIILGRALQGSGAIAAAVMALLSDLTREQNRTKAMAFIGVSFGITFAIAMVLGPIITHKLGLHALFWMIAILATTGIALTIWVVPNSSTHVLNRESGMVKGSFSKVLAEPRLLKLNFGIMCLHMLLMSTFVALPGQLADAGFPAAEHWKVYLATMLIAFGSVVPFIIYAEVKRKMKQVFVFCVGLIVVAEIVLWNAQTQFWQLVVGVQLFFVAFNLMEALLPSLISKESPAGYKGTAMGVYSTSQFLGVAIGGSLGGWIDGMFDGQGVFLAGAMLAAVWLAVASTMKEPPYVSSLRIEIPADIAANEALKVRLLETEGVKEVLIAEEEHSAYVKIDSKVTNRFEVEQAIRQAL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WDO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35711 for 471 contacts (-75.8/contact) +
2D Compatibility (PS) -11299 + (NN) -1587 + (LL) 0
1D Compatibility (HY) -7200 + (ID) 850
Total energy: -56647.0 ( -120.27 by residue)
QMean score : -0.157
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