Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LAKNTHMNVTVDFTNWGASKYDLRIPVHQPIKALIINLAETLKIDYKDLSKCTIKTTNKAILLSDDDKLTNFQIADGDILEIL------
1EUV Chain:B ((20-98))
--PETHINLKVSD---GSSEIFFKIKKTTPLRRLMEAFAKRQGKEMDS-----LRFLYDGIRIQADQTPEDLDMEDNDIIEAHREQIGG
General information:
TITO was launched using:
RESULT:
Template:
1EUV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42395 for 491 contacts (-86.3/contact) +
2D Compatibility (PS) -7854 + (NN) -2617 + (LL) 768
1D Compatibility (HY) -3600 + (ID) 750
Total energy: -56448.0 ( -114.97 by residue)
QMean score : 0.459
(partial model without unconserved sides chains):
PDB file :
Tito_1EUV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EUV-query.scw
PDB file :
Tito_Scwrl_1EUV.pdb
: