Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRGQEEIDKEQYQVLFIKERLIPCVLGAVIGDCLGVPVEFKDREYLKQ-----NPIVEMIGYGTYNQPKGTWSDDSSLTFALMESLI-SGYDINRIVNNMVSFMDDGFWTPYGEVFDIGSVTRESLNRYKNGVSVFECGGKDNFDNGNGAIMRIMPLVFYLGKDFSFGKKNKITEEVTRITHAHPRSILGSYVYIELLQNLFANMDKKLAYEEMQNYIRKNYSDYPFKDELQYYNNILEGNLYELKESNIKSSGYVVDTLEASIWAFLTTNSYKEAVLKAVNLGGDTDTIAFITGSLAGIYYKMEQIPVNWIDQIAKKEDILNLCNRFIESLIKQ |
| 1T5J Chain:A ((3-303)) | -------------LVKMRDKILGSVFGAVIGDALGMPTENLTKEEIKKLYGFVDSYVEPKNYLAGKLNKGEWTDDTEQAICLIKSLTKEGIDIKKFANCLIAWKNKN-------PPDIGLTSLMAIDKLENN------DYSGVDSSSCGAAMRIYPLGIVFHNN--LKKLKEEVIKASKITHNNKTAIAGALAIAFFVSSALKDRKDFSLLDECYNYIKDID-----EEFAKKLLEIKNFNNLDYIYDYFGTGVKTDEVVPSAIATYLLTDNFKEGMLKCINAGGDTDSLASMYGAMAGAYYGFKNIPKEWIDGLKNKEVIFELAERLYHLATE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1T5J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -159469 for 2801 contacts (-56.9/contact) +
2D Compatibility (PS) -31073 + (NN) -5142 + (LL) 2168
1D Compatibility (HY) -13200 + (ID) 4000
Total energy: -210716.0 ( -75.23 by residue)
QMean score : 0.474
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