Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLHTIDFSDIFSSDYSSKISFKKGEIIHSYRDYEEK--APQIGAILEGTAVLEGPTNEGRWMINALIGQHALFGMESLLETKTAPELTEYRVRALENGTVLFIDREFLLNYLYANPQFFHLILDEVIVRYLFTSKNYK-NINQAPIVKVTRILVEIIELLHLHQTEGSIELPVYVTQTFLADYCRSSRARVTEVLEELRESGLLLS-KKPITISSHENLLDQVDSFQTGNGLLTR
2ZCW Chain:A ((6-199))
----------------ETVSFKAGDVIL---YPGVPGPRDRAYRVLEGLVRLEAVDEEGNALTLRLVRPGGFFGEEALFGQ-ER----IYFAEAATDVRLEPLPEN-------PDPELLKDLAQHLSQGLAEAYRRIERLATQRLKNRMAAALLELSETPLAHEE--EGKVVLKATHDELAAAVGSVRETVTKVIGELAREGYIRSGYGKIQLLDLKGLKELAESRG--------
General information:
TITO was launched using:
RESULT:
Template:
2ZCW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -116358 for 1389 contacts (-83.8/contact) +
2D Compatibility (PS) -19879 + (NN) 1225 + (LL) 2152
1D Compatibility (HY) -2800 + (ID) 2000
Total energy: -137660.0 ( -99.11 by residue)
QMean score : 0.372
(partial model without unconserved sides chains):
PDB file :
Tito_2ZCW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZCW-query.scw
PDB file :
Tito_Scwrl_2ZCW.pdb
: