Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDAKSQQAEAQLQLLKKEQSAAKDFLQDLQRQQNEQEWLAEDVARVHQEERESLELLREVWQGAESRSFGYYLADLQEEEKQKWHKKIQANEEECQQKITACRKNIYQLENQQQDLQKELLQ
2LU7 Chain:A ((1-82))
MTRVRSTPGGDLELVVHLSGPGGP-----VRWYKDGERLASQ-GRVQLEQAGARQVLRV--QGARSGDAGEYLCDAPQD------------------------SRIFLVSVEEP--------
General information:
TITO was launched using:
RESULT:
Template:
2LU7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 54469 for 545 contacts (99.9/contact) +
2D Compatibility (PS) -7815 + (NN) 5000 + (LL) 4224
1D Compatibility (HY) -3200 + (ID) 1050
Total energy: 51628.0 ( 94.73 by residue)
QMean score : -0.112
(partial model without unconserved sides chains):
PDB file :
Tito_2LU7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LU7-query.scw
PDB file :
Tito_Scwrl_2LU7.pdb
: