Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYEKVEKIINDWDPIELFPLAPKDEYSQEINKIISIVQENPNIDMNVLGKGIRKIFIDSFGENLIFKNNEDEIAEKILAL
1Q2H Chain:A ((21-83))
---------PDWR--QFCELHAQAAAVDFAHKFCRFLRDNPAYDTPDAGASFSRHFAANFLDVFGEEVRRVLVA------
General information:
TITO was launched using:
RESULT:
Template:
1Q2H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5604 for 289 contacts (-19.4/contact) +
2D Compatibility (PS) -6517 + (NN) 1858 + (LL) 2168
1D Compatibility (HY) -2000 + (ID) 550
Total energy: -10645.0 ( -36.83 by residue)
QMean score : 0.235
(partial model without unconserved sides chains):
PDB file :
Tito_1Q2H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q2H-query.scw
PDB file :
Tito_Scwrl_1Q2H.pdb
: