Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRKVRISVRRLVEFVRRSGSIDNRMTSSDRALEGTKIHQLLQKEAGEEYAAEVRLNLDRIVDGIAFSLDGRADGIINGRMIDEIKTTETPMDEITENFRPLHWAQLICYGFMLAEKSDLAEVTLQLTYYQVVDKEVKQFQRVMSREELSVFVDDLLSQYAIWAKASAAWEMKRNKTIQELTFPYDSYRSGQRELAIAVYRTISSEESLFCEAPTGIGKTMSTLFPGIKAMGEGKTDKLFYFTAKTITRQVAEDALDEMRRKGLAARSVTITAKDKICFLDERKCEPDHCQFARGYYDRLNEALFDMLQSEEAITRQVVESYARKYTLCPFELSLDVALFCDVIVCDYNYLFDPVVYLKRFFAEGPGKYTFLVDEVHNLVDRARSMYSATLKKSAVMQVKRGLDAKNNKRLLNAINVMNKDMIALNKKLKDLDGTIYVQKNELIDWNESVLKFTFVAKEWLPQNTQSEIQADVLELYFESLRYVAIADFYDDRYVTQVTKSHGDLEIKQVCLDPSFLLSERLKLGSSSVLFSATLRPIDYYTNLLGGQEDTSRMIFSSPFKQKNMHLLVADYISTKYQMRENSMEAVVDALYALVSGENGNYLFFFPSFLYLQKVYDLFKEKYPNIRLQKQETAMDEERREHFLERFQAENVETLIGFCVLGGVFSEGVDLRGNRLVGAAVVGVGLAQLNHESDLIKDYYNETIGRGFDYAYQIPGMNKVLQAVGRVIRGESDRGVVLLIEERFSADRYRALFPTHWNHAKTVKSTDDISREVAGFWRNS |
1OYW Chain:A ((235-342)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RGKSGIIYCNSRAKVEDTAARLQSKG--ISAAAYHAGLENNVRADVQEKFQRD--DLQIVVAT--VAFGMGINKPN--VRFVVHFDIPRN-----------------------------IESYYQETGRAGRDGLPAEAMLFYDP-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OYW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72398 for 762 contacts (-95.0/contact) +
2D Compatibility (PS) -11514 + (NN) -2485 + (LL) 50820
1D Compatibility (HY) -800 + (ID) 750
Total energy: -37127.0 ( -48.72 by residue)
QMean score : 0.435
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