Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNESNGSMELYLREHTEEIINNWLSKIYE-NTYTSFVYSPQYKDELRADSEQTADLIISYFAGKKAFFEKLDKWLDNMYARRMENEVPLPEVITTLDKL-----RREFVTAVGDFCIHNDEVSKCEFSSSMAMVNHGFDRINEAFSAMYYNDIVKHLEQQHRLIEEISTPVISITDKLAILPLMGRVDRERAEKLSEITANKCVHLGVEQLCIDLSGITYFDDALGEMLTNLVTMLKLLGVEAFISGIQPKMAQQINRVDLNLSIPAYHSLKAVLQDQTRTI |
| 3PMC Chain:A ((8-135)) | ----KCLLCRYLKERQEKFISDWKKKVIIRERD-------PYKEEIIKNGEHLLSAFIMYLKEE-ISLQEIEITSKKIARERIDAKVNIAEFIHNTNVAKIEIMNILTLLN----------PDLQQYQALVKKINQFFDHLIYYTVHSYY------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PMC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32164 for 819 contacts (-39.3/contact) +
2D Compatibility (PS) -13051 + (NN) -4375 + (LL) 12080
1D Compatibility (HY) -5600 + (ID) 1100
Total energy: -44210.0 ( -53.98 by residue)
QMean score : 0.544
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