Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MLKIVGVRFKDVGKIYYFSPGELEITEN-QGVIVENAQG---------IEFGKTVIEPRYVDEEDVVLPLKKVLRIATEADYKCVAENGDSCQKAFLLCDEKIRERELEMSLVDVDYTFDRNKIIFYFTAEGRVDFRELVKDLASVFRTRIELRQIGVRDEAKLLGGIGPCGRM---LCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRL----MCCLKYENDEYEQAKR---------EMPDVGVKVKTPE-GAEARVS----GINLLSRILQVSLPEEETVIEYELDELRPYN-EFLKQPAKS |
| 3GS9 Chain:A ((3-339)) | SDIIVADFWNNEEILTDFDDSFESWTENEMWSIEFVAQTCYSFLDYESSVYFRGQEFVVKQLSHDATLSKDIRAPHIYYTCQDGRQDDAITGSFTLEQCLTHIFTDN----RGFSWEIIDPSNILEVQQENFGNNNYLTLIDQLLDDYGVVVIPDNRHLVFPREIYGAKTENFIRYYNTDEASFDIDTLSLTIGYGVDSNGNNYFSPITYTSPEVEWGIRWQEPVSDERYTVAGNMQRRLLELQDYPATTGSVILECEGDYVLFIYEPLGIDYDVQIVAYYPFTIAPEITLS-NNSIVSIMAQLAVLG-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3GS9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -1948 for 1758 contacts (-1.1/contact) +
2D Compatibility (PS) -28066 + (NN) -670 + (LL) 976
1D Compatibility (HY) 2400 + (ID) 1150
Total energy: -28458.0 ( -16.19 by residue)
QMean score : 0.180
|
|
|