Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----LEKLKLIGDERLDYLLAENLRI-IQSPSVFSFSIDAVLLAKFSYLPVRKGKIIDLCSGNGIIPLLLSTRTEAQIVGVEIQERLADMAKRSISYNQLEEQIEMIEYDLKNITDLIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPERLLDIIDIMRKYRLEPKRIQFVHPRIDKEANTVLVEGIKDGKPGVKYVPPVIVYDELGEYTPVIKEILYGESE |
| 3GDH Chain:B ((25-235)) | EIAAVPELAKYWAQRYRLFSRFDDGIKLDREGWFSVTPEKIAEHIAGRVSQSCDVVVDAFCGVGGNTIQFAL-TGMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGD---FLLLASFLKADVVFLSPP-WGGPDYATAET------------FDIRTMM------------------SPDGFEIFRLSKKI---TNNIVYFLPRNADIDQVASLAGPGG--------QVEIEQNFLNNKLKTITAYFGDLIR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GDH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77427 for 1742 contacts (-44.4/contact) +
2D Compatibility (PS) -21434 + (NN) -6311 + (LL) 3488
1D Compatibility (HY) -8400 + (ID) 1650
Total energy: -111734.0 ( -64.14 by residue)
QMean score : 0.358
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