Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIIFNADDFGISPGAVYGILESYKRGVVKSTTLLANSPAFDLAVEVAKE--NPGLDIGAHLTLTFGSPVLQGLETLTDDDGRFRRNYTSLENGLADVDMNEVERELTAQIEKILD-AGITISHFDTHHSIE-PLIYPVQHKLAEKYGVSIRRHSDVSDFGAIKTPDLFATEFYADGVSFETIKKLVQKHIGTNDVVEVMTHPAFIDETLREISSYVEPRIKEVSILTSRELQAYLGQQEVEIISFRDL
2NLY Chain:A ((4-137))KRAAIIIDDFGGDV----KGVDDFLTGEIP-VTVAVMPF-LEHSTKQAEIAQAAGLEVIVHMPLEPK---------------P---S-G----ITSNLSVGEVKSRVRKAFDDIPYAVGLNNH-M-GSKIVENEKIMRAILEVVKEKNAFIIDSGTS--------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2NLY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47593 for 899 contacts (-52.9/contact) +
2D Compatibility (PS) -13419 + (NN) -7360 + (LL) 8696
1D Compatibility (HY) -2000 + (ID) 900
Total energy: -62576.0 ( -69.61 by residue)
QMean score : 0.499

(partial model without unconserved sides chains):
PDB file : Tito_2NLY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2NLY-query.scw
PDB file : Tito_Scwrl_2NLY.pdb: