Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNAQAEEFKKYLETNGIKPKQFHKKELIFNQWDPQEYCIFLYDGITKLTSISENGTIMNLQYYK-GAFVIMSGFIDTETSVGYYNLEVISEQATAYVIKINELKELLSKNLTHFFYVFQTLQKQVSYSLAKFNDFSINGKLGSICGQLLILTYVYGKETPDGIKITLDNLTMQELGYSSGIAHSSAVSRIISKLKQEKVIVYKNSCFYVQNLDYLKRYAPKLDEWFYLACPATWGKLN
3E6C Chain:C ((21-233))
----PIEKLRNYTQ-MGLIRDFAKGSAVIMPGEEITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIGKLYPT-G----NNIYATAMEP-TRTCWFSEKSLRTVFRTDEDMIFEIFKNYLTKVAYYARQVAEMNTYNPTIRILRLFYELCSSQGKRVGD-TYEITMPLSQKSIGEITGVHH-VTVSRVLASLKRENILDKKKNKIIVYNLGELKHLSEQTSYYS------------
General information:
TITO was launched using:
RESULT:
Template:
3E6C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110577 for 1499 contacts (-73.8/contact) +
2D Compatibility (PS) -22380 + (NN) -3366 + (LL) 1144
1D Compatibility (HY) -6000 + (ID) 2000
Total energy: -143179.0 ( -95.52 by residue)
QMean score : 0.434
(partial model without unconserved sides chains):
PDB file :
Tito_3E6C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3E6C-query.scw
PDB file :
Tito_Scwrl_3E6C.pdb
: