Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LYKNYLQRTLVLLLCFILYFFTFPLGGKAYSLNNWNKPIKNSVTTKQWMSALPDTTNLAALSIPGTHDTMSYNGDITWTLTKPLAQTQTMSLYQQLEAGIRYIDIRAK----DNLNIYHGPIFLNASLSGVLETITQFLKKNPKETIIMRLKDEQNSN-DSFDYRIQPLI-NIYKDYFYTTPRTDTSNKIPTLKDVRGKILLLSENHTKK-PLVINSRKFG----MQFGAP---NQVIQDDYNGPSVKTKFKEIVQTAYQAS----KADNKLFLNHISATSLT---FTPRQYAAALNNKVEQFVLNLTSEKVRGLGILIMDFPEKQ----TIKNIIKNNKFN |
| 3EA1 Chain:A ((7-294)) | -----------------------------------------LENWSKWMQPIPDNIPLARISIPGTHDSGTFKLQN--PIKQVWGMTQEYDFRYQMDHGARIFDIRGRLTDDNTIVLHHGPLYLYVTLHEFINEAKQFLKDNPSETIIMSLKKEYEDMKGAEGSFSSTFEKNYFVDPI-----FLKTEGNIKLGDARGKIVLLKRYSGSNESGGYNNFYWPDNETFTTTVNQNVNVTVQDKYKVN-YDEKVK-SIKDTMDETMNNSEDLNHLYINFTSLSSGGTAWNSPYSYASSINPEIANDIKQK---NPTRVGWVIQDYINEKWSPLLYQEVIRANKS- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EA1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77002 for 2208 contacts (-34.9/contact) +
2D Compatibility (PS) -27743 + (NN) -8414 + (LL) 3452
1D Compatibility (HY) -13600 + (ID) 3600
Total energy: -126907.0 ( -57.48 by residue)
QMean score : 0.631
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