Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------MITFDQLDTELQALENPNTIK----IFRNHGCPDSLDLYGLKIGDLKKIIR--REKLTKNHELAVKLIESNN-SDLIYLGLLAINPNKITTEQIEKWNIAFRETWSQLTFG---------LASIVSKRDD---------------------ALLFAKTWIESDYDLTKSMGWQIYSEHIN--NLPEAETLLQRAKETLQTETNRTRYSMNGFIITC---GIYKDDLHEKAMEAAKSV-----GKVHVNLGNTAC-----------KVPDAIS-YIEKAR-NRTK |
| 4X2Z Chain:A ((9-309)) | QKTIYLTEDGVKYRSIVLKPGDSLGQFGQVYAKNKIVFTADDVEDKEILYVPTTDKSILEYYGLDAQKYVIYLQTLAQKWNVQYRDNFLILEWRDGNCWISSAIVLLQAAKI------RFKGFLTEAWAKLLGGDPTDFVAWCYASCTAKVGDFSDANWLLANLAEHFDADYTNAFLKKRVSCNCGIKSYELRGLEACIQPVRATNLLHFKTQYSNCPTCGANNTDEVIEASLPYLLLFATDGPATVDCDEDAVGTVVFVGSTNSGHCYTQAAGQAFDNLAKDRKFGKKSPYITAMYTRFAFKNETS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4X2Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -13983 for 1400 contacts (-10.0/contact) +
2D Compatibility (PS) -22318 + (NN) 6542 + (LL) 636
1D Compatibility (HY) -8400 + (ID) 1750
Total energy: -39273.0 ( -28.05 by residue)
QMean score : 0.095
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