Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKAKRTTKFVCQACGYESAKWMGKCPNCNEWNQMVEALEPSKKSRSAFNHTGEPSKATPITQIASETEKRVETNMPELNRVLGGGVVPGSMVLVGGDPGIGKSTLLLQVSAQLTLT-NKKVLYISGEESIKQTKLRAERLQVSGDNLY----------------------VYAETNLEAVQETIDFVKPDFVVIDSIQTVYHSDVTSAAGSVSQVRECTATLMRIAKMQN-IAIFIVGHVTKEGAIAGPRLLEHMVDTVLYFEGERHH--AYRILRAVKNRFGS-TNEMGIFEMRDVGLVEVANPSEVFLE-----------ERLEGASG-------STVVASMEGTRPVLVEIQALVSP----------TMFGNAKRMATGIDYNKVSLIMAVLEKRVGLMLQNQDAYLKAAGGVKLDEPA----VDLAVAVSVASSYRDKPTRSTDCFIGELGLTGE--------------------------------IRRVARIEQRVQEAAKLGFKRIFIPKNNEGNWKIPKDVQVVGVETIGEALKKALPD----- |
1TF7 Chain:A ((14-497)) | ----------------------------------------------------------------EHQAIAKMRTMIEGFDDISHGGLPIGRSTLVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEETPQDIIKNARSFGWDLAKLVDEGKLFILDASPDPEGQEVVGGFDLSALIERINYAIQKYRARRVSIDSV-----TSVFQQYDASSVVRRELFRLVARLKQIGATTVMTTERIEEYGPIARYGVEEFVSDNVVILRNVLEGERRRRTLEILKLRGTSHMKGEYPFTITDHGINIFPLGAMRLTQRSSNVRVSSGVVRLDEMCGGGFFKDSIILATGATGTGKTLLVSRFVENACANKERAILFAYEESRAQLLRNAYSWGMDFEEMERQNLLKIVCAYPESAGLEDHLQIIKSEINDFKPARIAIDSLSALARGVSNNAFRQFVIGVTGYAKQEEITGLFTNTSDQFMGAHSITDSHISTITDTIILLQYVEIRGEMSRAINVFKMRGSWHDKAIREFMISDKGPDIKDSFRNFERIISGSPTRI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TF7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -148557 for 2937 contacts (-50.6/contact) +
2D Compatibility (PS) -41674 + (NN) -10432 + (LL) 4352
1D Compatibility (HY) -5200 + (ID) 2650
Total energy: -204161.0 ( -69.51 by residue)
QMean score : 0.357
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