Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLTWVIRVCFLILGGTTGVFSLPALWVKLGIGHILLINNPYTDALIGALIFYLITFWAVKYVEAALNWLEEKLAKIAIATLVYGGLGLFVGLVIAFFASNALSQTNIPLLNSVVPVILTLVLGYLGFRIGISRRNEFGNFVNNRNAKKRTPEEEKTEEKSKKTYKILDTSVIIDGRIADILTTGFL-DGTVVIPLFVLAELQHIAD-SSDTLKRTRGRRGLDILNRIQKEDA---IQVEMY------EGDFEDTPEVDSK-LVKLAKVMGGIVVTNDYNLNKVCEFQNVPVLNINDLANAVKPVVLPGEKMTVLMVKDGKEHNQGVAYLDDGTMIVVEDGRKFINETIQVEVTSVLQTSAGRMIFAKPS |
3I8O Chain:A ((3-142)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------AKKVCVDTCVVIDGRITELIERGKLKDATIIIPEAVVSELEYQANMG-----REIGYKGIEELRKLIEKASEHNIKVEYYGERPTREEIFLAKSGEIDAMIRKVAKETNSILLTSDWIQYNLAKAQGIEAYFLEAAEEEVELVLD--------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3I8O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -85983 for 925 contacts (-93.0/contact) +
2D Compatibility (PS) -14280 + (NN) -3682 + (LL) 17784
1D Compatibility (HY) -8000 + (ID) 1850
Total energy: -96011.0 ( -103.80 by residue)
QMean score : 0.397
|
|
|