Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRIGQGYDVHKLAYDRDLIIGGVKIPYEKGLLGHSDADVLLHAITDAIIGAIGAGDIGHFFPDTDMVFKDADSAELLAEIWQKVEADGFRLGNLDATIIAEKPKMAPYVEQMKLRIAELLHADSAQVNVKATTTEKLGFTGREEGIASLAVVLLEK
1H48 Chain:F ((3-158))
-MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIK
General information:
TITO was launched using:
RESULT:
Template:
1H48.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110880 for 1322 contacts (-83.9/contact) +
2D Compatibility (PS) -17171 + (NN) -11155 + (LL) 208
1D Compatibility (HY) -14000 + (ID) 4850
Total energy: -157848.0 ( -119.40 by residue)
QMean score : 0.549
(partial model without unconserved sides chains):
PDB file :
Tito_1H48.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1H48-query.scw
PDB file :
Tito_Scwrl_1H48.pdb
: