Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPTRLKEDIATIIKNDPATKSFFDAFLTNPGLHALWWHRVANFFYRHKMVLFGKVLSQNARFWTNIEIHPGATIGRRLFIDHGAGIVIGETAEIGDDVTIFHGVTLGGTGKDCGKRHPTVGDGALVSAGAKVLGPVEIGAGARIGAGAVVLKDVPPGATVVGIPAKVVRLNGRTVGHAVPKMDELTLRIAELENIVEKLLKEKE
4HZC Chain:F ((91-260))
----LRVDIQAVYDRDPAYSRFMDPVLYLKGFHAIQTHRLAHWLYKQGRKDFAYYLQSRSSSIFQTDIHPAARLGSGLFLDHATGLVVGETAVVEDNVSILHGVTLGGTGKSSGDRHPKIRQGVLIGAGAKILGNIQVGQCSKIAAGSVVLKSVPHNVTVAGVPARIIGETGCT------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4HZC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110671 for 1384 contacts (-80.0/contact) +
2D Compatibility (PS) -18091 + (NN) -6365 + (LL) 3188
1D Compatibility (HY) -15200 + (ID) 3750
Total energy: -150889.0 ( -109.02 by residue)
QMean score : 0.543
(partial model without unconserved sides chains):
PDB file :
Tito_4HZC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HZC-query.scw
PDB file :
Tito_Scwrl_4HZC.pdb
: