Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEVKEYKQLNGLALAYMGDAVYEKFIREYLLA-AGKTKPNQLHKTATKFVSAKGQAVALKAMIAEGFLTEEEDRIAKRGRNAKSYTVPKNTDPGTYSMSTSFEAVLGYLYLAGEMERLQEWMEKALEIVEKGVETN
2A11 Chain:A ((39-152))
--------LPTNERLEFLGDAVLGLTITDALFHRHPDRSEGDLAKLRASVVNTQALADVARRLCAEG-LGV----HVLLGRGEANTGGAD----KSSILADGMESLLGAIYLQHGMEKAREVILRLFGPLL------
General information:
TITO was launched using:
RESULT:
Template:
2A11.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41658 for 784 contacts (-53.1/contact) +
2D Compatibility (PS) -12011 + (NN) -4032 + (LL) 1252
1D Compatibility (HY) -5200 + (ID) 1250
Total energy: -62899.0 ( -80.23 by residue)
QMean score : 0.447
(partial model without unconserved sides chains):
PDB file :
Tito_2A11.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A11-query.scw
PDB file :
Tito_Scwrl_2A11.pdb
: