Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VDNSVNQEELAMLELARSGDTEALEYFFSKYQSVIYWKSTQYFLQGAERDDLIQEAMIGLFKAIRDYDKTKEASFRSFAEMCINRQLLSAVKRASRQKNIPLNNSVSLDTPMAEDDVDWTLLDVISEKAAETPEDFLIKNEDLTHVARQLEQVTSEFEKEVLKQYLEGKSYQEMALFFNKKEKAIDNALQRVKKKMMKQLE |
| 3UGO Chain:A ((101-184)) | -----------YLHIAREG-EAARQHLIEANLRLVVSIAKKYTGRGLSFLDLIQEGNQGLIRAVEKFEYKRRFKFSTYATWWIRQAINRAIADQAR--------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UGO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -33743 for 535 contacts (-63.1/contact) +
2D Compatibility (PS) -9088 + (NN) -4808 + (LL) 9380
1D Compatibility (HY) -5200 + (ID) 1000
Total energy: -44459.0 ( -83.10 by residue)
QMean score : 0.527
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