Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VAKKVIKEVKLQIPAGKANPAPPVGPALGQAGVNIMGFCKEFNARTADQAGLIIPVVITVFEDRSFTFITKTPPAAVLLKKAAKVEKGSGEPNKTKVASVTRAQVQEIAETKMPDLNAANVESAMLMVEGTARSMGITIQD
3EGV Chain:B ((1-77))
--KKVVAVVKLQLPAGAATPAPPVGPALGQHGANIMEFVKAFNAATANMGDAIVPVEITIYADRSFTFVTKTPPASYLI--------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3EGV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59052 for 523 contacts (-112.9/contact) +
2D Compatibility (PS) -8474 + (NN) -3831 + (LL) 5000
1D Compatibility (HY) -8400 + (ID) 2550
Total energy: -77307.0 ( -147.81 by residue)
QMean score : 0.609
(partial model without unconserved sides chains):
PDB file :
Tito_3EGV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EGV-query.scw
PDB file :
Tito_Scwrl_3EGV.pdb
: