Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRNYHVKFLNEKDVELAEAVCAASEDYYL-IEQDKSASKSDALKIITEIPDGKTRFDKFVLAVLDENEKPIGLVDIVSDYPR-KGRWFIGLLLLTPDARHNGLGKVLHQTIKEWASDGGADSLALGVLAENEKGRGFFEHLGYTKEETKQ--ASYGGKEQEVSIFTLAIK
2GE3 Chain:A ((6-168))
--DTVTIKPIRAEHVESFHRALDAVSRERKYLSFLEAPPLEAVRAFVLDMIEN----DHPQFVAI-ADGDVIGWCDIRRQDRATRAHCGTLGMGILPAYRNKGLGARLMRRTLDAAHEFGLHRIELSVHADNARAIALYEKIGFAHEGRARDAVSIDGHYIDSLNMAIIF-
General information:
TITO was launched using:
RESULT:
Template:
2GE3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64926 for 1135 contacts (-57.2/contact) +
2D Compatibility (PS) -17213 + (NN) -5764 + (LL) 608
1D Compatibility (HY) -3600 + (ID) 1300
Total energy: -92195.0 ( -81.23 by residue)
QMean score : 0.567
(partial model without unconserved sides chains):
PDB file :
Tito_2GE3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GE3-query.scw
PDB file :
Tito_Scwrl_2GE3.pdb
: