Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDSAHSQLEQQLQQIKKAKITAETDADQTRRKQNEQDWLEEDSNQLTQEKRVLLDFLRSGWQGEEASSFHRYLEEQQHEESQVWRRDLQDKRSDLDTELQENKDRLHTLEAKQATLQKEWSQ
2VS0 Chain:A ((35-71))
----------------------------------------------------AQGEIAANWEGQAFSRFEEQF--------QQLSPKVEKFAQLLEE-------------------------
General information:
TITO was launched using:
RESULT:
Template:
2VS0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5353 for 156 contacts (-34.3/contact) +
2D Compatibility (PS) -3764 + (NN) -1001 + (LL) 7288
1D Compatibility (HY) -800 + (ID) 300
Total energy: -3930.0 ( -25.19 by residue)
QMean score : 0.359
(partial model without unconserved sides chains):
PDB file :
Tito_2VS0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2VS0-query.scw
PDB file :
Tito_Scwrl_2VS0.pdb
: