Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MISIVLVSHSQKITEGLQEMIVEMVGDTVHIISSGGTGDGRLGTNAIMIADNIAT----CTNSEHIYIFCDIGSAILSAETALELLDTDLLEKTTIIDAPLVEGAFTAAVQSLVNPSKEAILQELTNVH
3GX1 Chain:A ((4-119))
QVEVIVMMHGRSTATSMVETVQELLSIE-SGIALDM----PLTVEVKAMYEKLKQTVVKLNPVKGVLILSDMGSLTSFGNILTEEL-G---IRTKTVTMVSTPVVLEAMRKASLGRGLEDIYQSC----
General information:
TITO was launched using:
RESULT:
Template:
3GX1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75144 for 884 contacts (-85.0/contact) +
2D Compatibility (PS) -12492 + (NN) -7260 + (LL) 232
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -99064.0 ( -112.06 by residue)
QMean score : 0.483
(partial model without unconserved sides chains):
PDB file :
Tito_3GX1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GX1-query.scw
PDB file :
Tito_Scwrl_3GX1.pdb
: