Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKNLFLTSSFKDVVPLFTEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEELDIATESLGEITTKLRKNDFIYVTGGNTF-FLLQELKRTGADKLILEEIAAGKLYIGESAGAVITSPNIAYIQTMDSTKKAVNLTNYDALNLVDFSTLPHYNNTPFKEITQKIVTEYAGKSQIYPISNHEAIFIRGKEVITKRLS |
1JVN Chain:A ((4-112)) | -------------------------MPVVHVIDVES------GNLQSLTNAIEHLGYEVQLVKSPK----DF--NISGTSRLILPGVGNYGHFVDNLFNRGFEKPIREYIESGKPIMGI-VGLQALFA------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JVN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38817 for 612 contacts (-63.4/contact) +
2D Compatibility (PS) -9922 + (NN) -4950 + (LL) 8280
1D Compatibility (HY) -4400 + (ID) 950
Total energy: -50759.0 ( -82.94 by residue)
QMean score : 0.463
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