Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDKKSENQTEKTETKENKGMTRREMLKLSAVAGTGIAVGATGLGTILNVVDQVDKALTPKEKAETGVPFYASNQAGIITAQQTYCYIASFDIQTE--SRQILQDLFVKWTKFADLTTSGGVLRDVDNDMLPPNDTGEADGLGISNFTVTLGYGPTFFEKDGKDRFGVKAKKPKYLEKIPHMAHDSLDEAYSDGDLCIQVCADDQQVAFHGIRNFIRLASGVAVVRWIEEGFLSAPKNETPRNLFGFKDGTANVDHDSNKGYKDVVWAEKDEPEWMRNGSYLGYRKIQMLIEIWDRSSLLDQEDTFGRKKASGAPYHKKHEHDKVDPSKLPADSHVRLAKDT-----KQQMHRRAYSYTNGIDKSTGTIDAGLLFICFTQNPAKQFLPMLSIMGK------MDKLNEYTVPIGSAMFACQGGLAPGEIFGEKLL |
| 3QNS Chain:A ((11-316)) | -----------------------------------------------------------------------LAPQAV-LTPPSAASLFLVLVAGDSDDDRATVCDVISGIDGPLKAVGFRE---------------------LAGSLSCVVGVGAQFWDRV-----S-ASSKPAHLHPFVPLSGPVHSAPSTPGDLLFHIKAARKDLCFELGRQIVSALGSAATVVDEVHGFRYF----DSRDLLGFVDGTENPTDD---DAADSALIGD-EDPDFRGGSYVIVQKYLHDMSAWNTLSTEEQERVIGRTKLENVELDD---------DAQPSNSHVTLNTIVDDDGVEHDILRDNMAFGSLG-----EAEYGTYFIGYAKDP-AVTELMLRRMFLGEPPGNYDRVLDFSTAATGTLFFVPSRDVLESL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QNS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104548 for 2463 contacts (-42.4/contact) +
2D Compatibility (PS) -30468 + (NN) -6667 + (LL) 5720
1D Compatibility (HY) -7600 + (ID) 2950
Total energy: -146513.0 ( -59.49 by residue)
QMean score : 0.327
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