Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEVKDILTKELVVFDLEATTKETAIEEMAEMLDERGILADKATYVQAVLER-EAHSTTG-IGNNIAIPHGKSE-SVTKSAIVFARTKEMIEWESLDDEPVNMIFLLAITDSDKTDGHLKILAEIATKLMDDDIVESLKNTRDKEEVIRILNGGVVEI
3OXP Chain:A ((5-149))
--LKTLLTSDVIQVVSQAKDWRDAIAISCQPLIDNGAV--EARYVEAIYRSHEAIGPYYVVGPGIAMPHARPEDGVNRLSLALTVITEGVTFNAEGNDPVKLLIVLAATDS---NSHIEAISQLAQLFDTASDVQALLNAKTPQDILSVIAR-----
General information:
TITO was launched using:
RESULT:
Template:
3OXP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87986 for 1092 contacts (-80.6/contact) +
2D Compatibility (PS) -15536 + (NN) -7975 + (LL) 940
1D Compatibility (HY) -10000 + (ID) 1700
Total energy: -122257.0 ( -111.96 by residue)
QMean score : 0.605
(partial model without unconserved sides chains):
PDB file :
Tito_3OXP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OXP-query.scw
PDB file :
Tito_Scwrl_3OXP.pdb
: