Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LKGLKKMKYSIQFSDAIHILAYIEIFKNTNLLSSEIIAGSVKTNPANIRRIMSNLKKANLITTQTGKAN-PILTKPPEEISLLDVYKSIEGNTNLIHVDPKTNPDCIVGANIQQVLSSKYELLQQKIELEMDEIKLDSIIHDISVLESKDRPQNNEFITKFL
2HEO Chain:A ((9-66))
------------DNLEQKILQVLSDD--GGPVAIFQLVKKCQVPKKTLNQVLYRLKKEDRVSSPS--PKYWSIG----------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2HEO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42856 for 357 contacts (-120.0/contact) +
2D Compatibility (PS) -5824 + (NN) -305 + (LL) 6868
1D Compatibility (HY) -2000 + (ID) 250
Total energy: -44367.0 ( -124.28 by residue)
QMean score : 0.715
(partial model without unconserved sides chains):
PDB file :
Tito_2HEO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HEO-query.scw
PDB file :
Tito_Scwrl_2HEO.pdb
: