Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTYLVTGATGGLGGYALNYLKELV-PMSDIYALVRSKEKGADLKAAGFNIRVGDYSDAESMKQAFAGIDRVLFVSGAPGNRQVEHENVINAAKKAGVSYIAYTSFAGADKSTSALAEDHFFTEKVIEKSGIAHTFLRNNWYFENEMPMIGGALSAGKFVYAA-ENGKVGWALKREYAEVAAKAVAG-AGFPEILELSGPL-MTYEELTKALKEATGKDFDVISSDDKGFVENLVSVGLPQPVAEMFLSFQHDIKNDQLDVTSDDFEKALGKPLTNRVDALRELLK |
| 2ZCU Chain:A ((1-282)) | -MIAITGATGQLGHYVIESLMKTVPA-SQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLIS-------PQHRNVINAAKAAGVKFIAYTSLLHADTSPLGLADEHIETEKMLADSGIVYTLLRNGWYSENYLASAPAALEHGVF-IGAAGDGKIASATRADYAAAAARVISEAGHEGKVYELAGDSAWTLTQLAAELTKQSGKQVTYQNLSEADFAAALKSVGLPDGLADMLADSDVGASKGGLFDDSKTLSKLIGHPTTTLAESVSHLF- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZCU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -160150 for 2352 contacts (-68.1/contact) +
2D Compatibility (PS) -29762 + (NN) -17229 + (LL) 472
1D Compatibility (HY) -17600 + (ID) 4950
Total energy: -229219.0 ( -97.46 by residue)
QMean score : 0.601
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