Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLKKRLLLASRWIIMLIIYAGLWTYTLFQGDTASWFLTYFFSFILLLLFLSSIYPLKAWKVNRSFVKNTYHDGDLIDMQVSFTRKSRYPVGYLLFQQKIPATFGKVRARQQVVYPLFKKQFTVTLAGFVGVRGIHSFPPVDVETSDAFGLLERSRQLSSEKSLTIYPTYFPNVLEKISEASPENERNAAYWTLKKNSNLHSLREFSSGDRISLIDWKSSAKSDQLMTREFENSATSRLSVIFYGASHPNFELSLRAAYSFIRKISEENGEIRVTLLGDQTSKFAPAKGTSRLQDISTAFAEIAPVDSLTLQESLDSNLHSG-EKILLFTPCMDTMLMQKVTRLT---DNKQLQIITFQSEHSKAMDAPAIFLEQASLLSRWERETK |
4TQ3 Chain:A ((15-301)) | SKYLRLLRPVAWLCFLLPYAVGFGFGITPNASLQHAVLGLLSFAFWMAFSFTINALYDRDVDR------LHDGLNLSMQPLVTGEISVREAWLYCIAFLALSLATAAA--------INEKFFLAMLGANIIGYVYSAPP----------------------------------------------RFKAW---------------------PVMDVICNALAAVLAFYAGLSIGGAEVPIAIYPA-----AFFLAATFYIPTAVSD-----------YEFDKKAGLKNTPVFFGPERALKSLYPLSAITVILWAYVFLMAERIEIKVISPLIIAYTLIYTFIINSRWDGEKLNVSPNLILTPFGIISALFIAYGFAVISV------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TQ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110227 for 2331 contacts (-47.3/contact) +
2D Compatibility (PS) -28949 + (NN) -4650 + (LL) 6236
1D Compatibility (HY) -16800 + (ID) 2500
Total energy: -156890.0 ( -67.31 by residue)
QMean score : 0.201
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