Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----------MKLLLKNINELAAKQKSEGLTAFEKERQAALRQE----YLKKIRGTVQDNLHHVTIIDPLGDDVTPKK-LKEIQAELRG--------------------
2DIQ Chain:A ((1-110))
GSSGSSGRSLQLDKLVNEMTQHYENSVPEDLTVHVGDIVAAPLPTNGSWYRARVLGTLENGNLDLYFVDFGDNGDCPLKDLRALRSDFLSLPFQAIECSLARIASGPSSG
General information:
TITO was launched using:
RESULT:
Template:
2DIQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2075 for 474 contacts (-4.4/contact) +
2D Compatibility (PS) -7305 + (NN) 2781 + (LL) 0
1D Compatibility (HY) -2400 + (ID) 650
Total energy: -9649.0 ( -20.36 by residue)
QMean score : 0.326
(partial model without unconserved sides chains):
PDB file :
Tito_2DIQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DIQ-query.scw
PDB file :
Tito_Scwrl_2DIQ.pdb
: