Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQKEMLNFDYYNPTHIIFGKNRFNELNEVIPQ-DK-KVLILYGGGSVERFGTLDKVKAA--LKSREVGEFGGIEANPTYETLIKAIQLVKEENYDFLLAVGGGSVIDGTKFVAAGALFDGEPMDIFGSGIGEKRPITKALPFGTVLTLPATGSEMNSGGVITFVEKKAKLGFGSAYTYPVFSLLDPELTYTLPKRQLANGIMDAYVHVMEQYMTYPVGALLQDRYAESLLQTLIEIGPDVIKEDNHDYNTRATFMWSATNALNGTLSRGVPQDWASHSLGHEITALYGIDHARTLAIVLPSLLNVRRSEKHDKLVQYAERVWGITSGS--DEEKIDAAILKTREFFESLGAGTRFSDYGLGEEVVDLLVDQLDRHGLTNISERGDQTLEVSRQIYTNAL
1RRM Chain:A ((2-383))-----MANRMILNETAWFGRGAVGALTDEVKRRGYQKALIVTDKTLV-QCGVVAKVTDKMDAAGLAWAIYDGVVPNPTITVVKEGLGVFQNSGADYLIAIGGGSPQDTCKAIGIISNNPEF-ADVRSLE-GLSPTNKPSVPILAIPTTAGTAAEVTINYVITDEEKRRKFVCVDPHDIPQVAFIDADMMDGMPPALKAATGVDALTHAIEGYITRG-AWALTDALHIKAIEIIAGALRGSVAG---DKDAGEEMALGQYVAGMGFS---NVGLGLVHGMAHPLGAFYNTPHGVANAILLPHVMRYNADFTGEKYRDIARVM-GVKVEGMSLEEARNAAVEAVFALNRDVGIPPHLRDVGVRKEDIPALAQAALDDV-CTGGNPREATLEDIVELYHTAW


General information:
TITO was launched using:
RESULT:

Template: 1RRM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -170704 for 3602 contacts (-47.4/contact) +
2D Compatibility (PS) -40358 + (NN) -17298 + (LL) 1184
1D Compatibility (HY) -12000 + (ID) 3800
Total energy: -242976.0 ( -67.46 by residue)
QMean score : 0.450

(partial model without unconserved sides chains):
PDB file : Tito_1RRM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1RRM-query.scw
PDB file : Tito_Scwrl_1RRM.pdb: