Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRDGHTHTEFCPHGTHDDVEEMILKAIELDFDEYSIVEHAPLSREFMNNTAGDKEAVTTASMAMSDLPYYFKKMNHIKKKYASDLLIHIGFEVDYLIGYEDFTRDFLDEYGPQTDDGVLSLHFLEGQGGFRSIDFSAEDYNEGIVQFYGGFEQAQLTYLEGVKQSIEADLGLFKPRRIGHISLCQKFQQFFGADTSNFSGEVMEEFQAILALVKKRDYELDFNTAGLFKSLCGETYPPKEIVTLARELKIPLVYGSDSHGVQDIG--RGYNTYCQK---------------------------------- |
1M65 Chain:A ((2-245)) | YPVDLHMHTVASTHA-YSTLSDYIAQAKQKGIKLFAITDHGPDMEDAPHHWHFINMRI--------------------WPRVVDGVGILRGIEAN--IKNVDGEIDCSGKMFDSLDLIIAGFHE----------------------------PVFAPHDKATNTQAMIATIASGNVHIISHPG----------------NPKYEIDVKAVAEAAAKHQVALEINN----------SSNCREVAAAVRDAGGWVALGSDSHTAFTMGEFEECLKILDAVDFPPERILNVSPRRLLNFLESRGMAPIAEFADL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1M65.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -58012 for 1690 contacts (-34.3/contact) +
2D Compatibility (PS) -20935 + (NN) -6938 + (LL) 4320
1D Compatibility (HY) 800 + (ID) 1700
Total energy: -82465.0 ( -48.80 by residue)
QMean score : 0.287
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